PhD Stipend in Microbial Genomics

Do you want to participate in establishing a global digital laboratory for microbial genomics? And do you see yourself as a team player who can strenghten our collaborations nationally and internationally? If yes, we look forward to reading your application to our PhD Stipend.

At the Faculty of Engineering and Science, Department of Chemistry and Bioscience, a PhD Stipend is available within the general study program. The PhD Stipend is open for appointment from 01.02.2026 or as soon as possible thereafter. The position is for 3 years, and the workplace is in Aalborg.

Your work tasks
 You will be leading the establishment of a centralized repository for genomic data and metadata, with a strong emphasis on existing and novel methods for the evaluation of genome quality, indexing and clustering methods for genome-wide searches, and genome-based taxonomy and nomenclature. You will also interact with the internal and external project collaborators to establish modular and maintainable pipelines and explore large genomic datasets. Your tasks will include quantitative data analysis, sequence processing and evaluation, and pipeline development and automation. It is expected that you will lead the writing of manuscripts describing these efforts. Iterative FAIRification and Software documentation is also expected as part of the group’s efforts on Open and Reproducible Science.

Your competencies
A master’s degree in ecology, biology, microbiology, bioinformatics, or a closely related field is an advantage. Excellent oral and written English language skills are a requirement. Previous experience in computer programming is an advantage but is not required. A strong interest in evolutionary principles, ecological principles, and data science are expected. The applicant must be interested in working in an interdisciplinary research environment and must commit to upholding the highest ethical and academic standards.

Qualification requirements
PhD stipends are allocated to individuals who hold a Master's degree. PhD stipends are normally for a period of 3 years. It is a prerequisite for allocation of the stipend that the candidate will be enrolled as a PhD student at the Doctoral School of Engineering and Science  in accordance with the regulations of Ministerial Order No. 1124 of September 19, 2025 on the PhD Programme at the Universities and Certain Higher Artistic Educational Institutions. According to the Ministerial Order, the progress of the PhD student shall be assessed at regular points in time.

Who we are    

At the Department of Chemistry and Bioscience (BIO), our high-level research spans from basic to applied within both natural sciences and engineering. With approx. 150 employees, 75 PhD students, and 775 bachelor and master’s students at our campuses in Aalborg (main campus) and Esbjerg. We are a vital research and educational institution when it comes to creating new basic knowledge as well as contributing to solving the world’s challenges within biology, chemistry, biotechnology, bioengineering, environmental science, and chemical engineering.

We continuously improve our department as an attractive place of work and study. We offer flexible hours, social activities throughout the year both at the department level and in each Section. We are inclusive and have respect for individuals, communities, and cultures. Our work culture is founded on openness, curiosity, transparency, and involvement. Come join us! 
Read more about the department here; Welcome to the Department of Chemistry and Bioscience - en.bio.aau.dk - Aalborg University.

How to apply
Your application must include the following:

• Application, stating reasons for applying and qualifications in relation to the position
• Curriculum Vitae (CV)
• Diplomas (bachelor and master's degree diploma)
• Project description 1-2 pages
• Other relevant documents

The application must be submitted via Aalborg University’s recruitment system, which can be accessed under the job advertisement on Aalborg University's website. 

Aalborg University wants to reflect the surrounding society and has diversity as a core value. Therefore, everyone, regardless of personal background and orientation, is encouraged to apply for the position.

Do you have any questions?     
If you have any questions about the position, you are more than welcome to contact us. You will find contact persons at the bottom of the jobpost.

Further information  
We recommend that you save a copy of the job posting, as it will be removed once the application deadline has passed.  

The assessment of candidates for the position will be carried out by qualified experts.
Shortlisting will be applied. This means that after the application deadline, the head of the department, with the assistance of the hiring committee, will select the applicants to be assessed. All applicants will be informed whether they have been shortlisted for assessment or not.

The hiring process at Aalborg University may include a risk assessment as a tool to identify potential risks associated with new hires, ensuring the safety, compliance, and integrity of the workplace.

Read more about The Doctoral School of Engineering and Science

Salary and terms of employment
The employment is in accordance with the Ministerial Order on the Appointment of Academic Staff at Universities (the Appointment Order) and the Ministerial Order on Job Structure for Academic Staff at Universities (in Danish) and protocol on certain terms of employment of academic staff at universities (in Danish). 

Salary and terms of employment are in accordance with the collective agreement between the Danish Confederation of Professional Associations and the state (AC collective agreement) (in Danish) and protocol on certain terms of employment of academic staff at universities (in Danish).